| Locus |
Predicted length
(amino acids); TAIR |
TargetP predicted localization (score) |
Predotar predicted localization (score) |
Knockout
lines/Insertion site/Homozygote ID'd (Bold indicates lines phenotyped) |
Gene Model
Image with Insertion Sites |
Chloroplast
Morphology in Knockout |
Phenotype Image |
Other
Experimental Findings |
Publications/Notes
on Function |
| At1g53140 |
818 |
Chloroplast (.674) |
Neither |
SALK_065118 Intron
yes SALK_062383 SALK_066401 |
|
Similar
to WT |
|
Not
functionally redundant with ARC5. Not involved in chloroplast division. |
|
| At3g19180 |
819 |
Chloroplast (.723) |
Mitochondrion (.864) |
SALK_100009 Exon
yes |
|
Fewer
larger chloroplasts than in WT |
|
Similar
to plastid division protein ARC6 and cyanobacterial cell division protein
Ftn2. Long FtsZ filaments but no Z-rings in mutant. |
|
| At4g33540 |
371 |
Chloroplast (.883) |
Chloroplast (.924) |
SALK_039451 Exon
yes |
|
Chloroplasts
somewhat larger, less numerous than in WT |
|
Chloroplast
localization confirmed. |
|
| At4g04770 |
557 |
Chloroplast (.985) |
Chloroplast (.998) |
SALK_033937* Exon
yes SALK_032232* Exon yes SALK_032328 Exon SALK_105161 Exon
*insertion sites nearly identical |
|
Similar
to WT |
|
|
Xu X.M., Adams
S., Chua N.-M.and Møller S.G.
2005. AtNAP1 represents an
atypical SufB protein in Arabidopsis plastids. J. Biol.Chem. 280:6648-6654.
At4g04770 locus encodes plastid
Fe-S cluster assembly protein AtNAP1, which is homolog of prokaryotic SufB
important for Fe-S cluster assembly in bacteria. |
| At1g32500 |
475 |
Chloroplast (.897) |
Chloroplast (.852) |
SALK_055996 Exon yes SALK_024545 F130-5'
yes |
|
Similar
to WT |
|
|
Xu X.M. and S.G.Møller. 2004.
AtNAP7 is plastidic SufC-like ATP-binding cassette_ATPase essential
for Arabidopsis embryogenesis. PNAS USA, 101: 9143-9148.
At1g32500 encodes a plastid SufD homolog in Arabidopsis, designated as AtNAP6 protein, which is homolog of
prokaryotic SufD important for Fe-S cluster assembly in bacteria. |
| At5g44316 |
470 |
Chloroplast (.527) |
Chloroplast (.998) |
SALK_063736 Exon
yes |
|
Similar
to WT |
|
|
Xu, X.M., Adams S., Chua N-M. and Moller
S.G. 2005. AtNAP1 represents an atypical SufB protein
in Arabidopsis plastids. J. Biol.Chem.
280:6648-6654.
Wang T. Iron Sulfur Cluster Assembly
in Photosystem of Cyanobacteria: the role of sufR(SUF)and Fdx(ISC)”. 2004. Ph.D.Thesis. The Pensylvania State
University.
The At5g44316 gene product is similar to AtNAP1 (SufB), but is not expressed
(Xu et al 2005). It may be more
closely related to SufD from cyanobacteria (Wang
2004). |
| At1g03160 |
912 |
Chloroplast (.871) |
Neither |
SALK_033745 Exon
yes
SALK_009051 Intron & 3'UTR yes |
|
Similar
to FZO. Chloroplast localization
confirmed by GFP fusion. No mitochondrial targeting or effect on
mitochondrial morphology. Proposed
role in regulating distribution of grana and stroma thylakoids. |
|
Enlarged chloroplasts
heterogeneous in size. |
Gao H., Sage T.
and Osteryoung K. W. 2006. FZL, an FZO-Like Protein In Plants, is a
Determinant of Thylakoid and Chloroplast Morphology. Proc. Natl. Acad. Sci.
USA., 2006. 103:6759-6764.
At1g03160 is proposed to play a
role in regulating distribution of grana and stroma thylakoids.
|
| At5g46800 |
300 |
- |
Chloroplast (.539) |
SALK_037607 300-UTR 3'
yes |
|
Similar
to WT |
|
|
Hoyos
M.E., Palmieri L., Wertin T., Arrigoni R., Polacco J.C., Palmieri F. 2003.
Identification of a mitochondrial transporter for basic amino acids in
Arabidopsis thaliana by functional reconstitution into liposomes and by
complementation in yeast. Plant J. 33: 1027-1035.
At5g46800 locus encodes
ornithine carrier protein AtmBAC1 related to the yeast ornithine carrier
protein Ort1/Arg11p. |
| At5g64970 |
428 |
- |
Neither |
SALK_093877 300-UTR 3' yes
SAIL_580_C07 Exon yes |
|
Similar
to WT |
|
|
|
| At2g47490 |
312 |
- |
Neither |
SALK_021618 Exon yes
|
|
Similar
to WT |
|
|
Bedhomme M, Hoffmann M, McCarthy EA,
Gambonnet B, Moran R, Re´ beille´ F and S. Ravane (2005). Folate metabolism in plants. An Arabidopsis homolog of the
mammalian mitochondrial folate transporter mediates folate import into
chloroplasts. J. Biol. Chem. 2005, 280:34823-34831.
At2g47490 is a paralog of chloroplast folate transporter AtFOLT1, but has not been shown to
have folate transport activity and is not targeted to chloroplasts. Anotated as putative mitochondrial carrier
protein. |
| At3g49660 |
317 |
Chloroplast (.760) |
Chloroplast (.963) |
SALK_015101 Exon
yes |
|
Similar
to WT |
|
|
Xu J., Sato S.,
Clemente T., Cerutti H. A. A WD-40-repeat containing protein is required for
efficient H3K9 dimethylation and normal development in Arabidopsis. Plant Genetics 2003 Abstracts.
#140.
At3g49660 encodes putative
homolog of Chlamydomonas Mut11. AtMut11 is a component of a molecular
machinery involved in the modulation of chromatin structure and
transcriptional repression in Arabidopsis. Localized to nucleus. |
| At1g58230 |
1281 |
Chloroplast (.863) |
Neither |
SALK_008055 Exon
yes SALK_078439 Exon
yes |
|
Similar
to WT |
|
|
|
| At3g57090 |
170 |
- |
Neither |
SALK_140317
Exon yes SALK_086794 Exon yes |
|
Similar
to WT |
|
|
Scott I., Tobin
A.K. and D.C. Logan (2006). BIGYIN, an orthologue of human and yeast FIS1
genes functions in the control of mitochondrial size and number in
Arabidopsis thaliana. J. Exp. Bot:
57,1275–1280.
At3g57090 is BIGYIN. |
| At5g12390 |
168 |
Secretory (.797) |
Neither |
No
SALK or SAIL lines |
|
|
|
|
Scott
I., Tobin A.K. and D.C. Logan (2006). BIGYIN, an orthologue of human and
yeast FIS1 genes functions in the control of mitochondrial size and number in
Arabidopsis thaliana. J. Exp. Bot: 57,1275–1280.
At5g12390 is similar to BIGYIN
(At3g57090). |
| At1g18370 |
975 |
Chloroplast (.823) |
Chloroplast (.595) |
SALK_056766 Exon
yes |
|
No
chloroplast division defects; plants dwarfed |
|
|
Nishihama R., Soyano T.,
Ishikawa M., Araki S., Tanaka H., Asada T., Irie K., Ito M., Terada M., Banno
H., Yamazaki Y. and Y. Mashida. 2002.
Expansion of the Cell Plate in Plant Cytokinesis Requires a
Kinesin-like Protein/MAPKKK Complex. Cell 109:87-99.
At1g18370 is NACK1 and is shown
to be involved in cytokinesis. It localizes to the cytoplasm and
phragmoplast equator. |
| At3g20150 |
1115 |
Chloroplast (.913) |
Chloroplast (.880) |
SALK_002073
intron SALK_012772 intron SALK_039654 exon |
|
|
|
|
|
| At4g14150 |
1292 |
Chloroplast (.872) |
Chloroplast (.687) |
SALK_058036 promoter
yes SALK_142464 promoter yes |
|
Similar
to WT |
|
|
Lee YR and Liu B. Identification
of a phragmoplast-associated kinesin-related protein in higher plants. 2000. Curr Biol. 10:797-800.
Pan R, Lee YR, Liu B. 2004. Localization of two homologous Arabidopsis
kinesin-related proteins in the phragmoplast.
Planta. 220:156-64.
At4g14150 is AtPAKRP1 and is
localized phragmoplast microtubules. |
| At4g14330 |
870 |
Chloroplast (.722) |
Chloroplast (.756) |
SALK_145633 exon
yes |
|
No
chloroplast division phenotype; plants dwarfed, late-flowering |
|
|
Lee YR, Giang HM. and Liu B.
2001. A Novel Plant Kinesin-Related Protein Specifically Associates with the
Phragmoplast Organelles. Plant Cell 13: 2427–2440.
At4g14330 is AtPAKRP2. |
|
|
|
|
|
|
|
|
|
|